Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 MIR4795-201ENST00000584182 89 ntBASIC9.3□□□□□ -0.92
LRCH3Q96II8 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 AC012065.3-201ENST00000602736 439 ntBASIC9.3□□□□□ -0.92
LRCH3Q96II8 AL078624.2-201ENST00000605063 554 ntBASIC9.3□□□□□ -0.92
LRCH3Q96II8 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 CDK2AP2P1-201ENST00000617479 328 ntBASIC9.3□□□□□ -0.92
LRCH3Q96II8 AC073569.3-201ENST00000619055 682 ntBASIC9.3□□□□□ -0.92
LRCH3Q96II8 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 AC020951.1-201ENST00000624361 2271 ntBASIC9.3□□□□□ -0.92
LRCH3Q96II8 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
LRCH3Q96II8 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC9.3□□□□□ -0.92
LRCH3Q96II8 AC074043.1-201ENST00000483126 1776 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC092620.3-201ENST00000562796 2764 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC128688.2-201ENST00000563632 1937 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AP000705.2-201ENST00000433524 1386 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 IL6STP1-201ENST00000346911 1020 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 Y_RNA.160-201ENST00000363677 92 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 CCNG1P1-201ENST00000406783 885 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 FDPSP6-201ENST00000425091 512 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 RPS4XP16-201ENST00000427198 791 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 PFN1P1-201ENST00000442087 423 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 GAS5-219ENST00000449289 542 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC098824.1-201ENST00000453565 980 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC013267.1-201ENST00000458227 267 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC105910.1-201ENST00000482585 483 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 IGBP1P5-201ENST00000507524 1000 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC114786.4-201ENST00000508771 728 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC020612.1-201ENST00000547655 541 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC090971.3-201ENST00000557871 1041 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MIR4528-201ENST00000577763 90 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MTCO3P22-201ENST00000603219 784 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL392112.1-201ENST00000605115 829 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL050343.2-201ENST00000607338 280 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 AL590560.2-201ENST00000608430 732 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MIR4278-201ENST00000636094 69 ntBASIC9.29□□□□□ -0.92
LRCH3Q96II8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
LRCH3Q96II8 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
LRCH3Q96II8 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms