Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 AC129502.1-201ENST00000623261 1654 ntBASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 SAMMSON-210ENST00000641260 1308 ntBASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 AL139384.2-201ENST00000613809 3590 ntBASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 AC093278.2-201ENST00000564956 2485 ntBASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC71LQ8N9Z2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 RPL24P4-201ENST00000326586 421 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 CES5AP1-201ENST00000400418 859 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC068137.1-201ENST00000429272 584 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 CICP10-201ENST00000439497 198 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 CRYGGP-201ENST00000443337 145 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SL516P-201ENST00000496127 297 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 MRPL57P6-201ENST00000506570 309 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 SCARNA6-201ENST00000515982 265 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AP006587.5-201ENST00000532033 739 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC068631.3-201ENST00000538831 225 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 CRADD-211ENST00000552983 839 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 MIR4470-201ENST00000583453 72 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC011497.2-201ENST00000600255 639 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AL109936.2-201ENST00000605350 650 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC068234.2-201ENST00000619646 522 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AC140479.2-201ENST00000421567 3130 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 AL117378.2-201ENST00000622916 1337 ntBASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC71LQ8N9Z2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC009120.2-204ENST00000621548 2032 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms