Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNORA16A-202ENST00000628458 135 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 OR5M2P-202ENST00000641241 4242 ntBASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
C9orf40Q8IXQ3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
C9orf40Q8IXQ3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
C9orf40Q8IXQ3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
C9orf40Q8IXQ3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
C9orf40Q8IXQ3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
C9orf40Q8IXQ3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
C9orf40Q8IXQ3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 RN7SKP118-201ENST00000364331 330 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 NPM1P36-201ENST00000415681 835 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC000089.1-201ENST00000424559 801 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AL590128.1-201ENST00000433407 286 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 HMGN1P32-201ENST00000441744 256 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 RPL23AP28-201ENST00000448062 470 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 RN7SL834P-201ENST00000461450 286 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC063955.1-201ENST00000462872 685 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC137549.1-201ENST00000514243 533 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC010442.1-201ENST00000515583 816 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC140063.1-201ENST00000541343 259 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 SNORA70D-201ENST00000578836 135 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC020765.1-201ENST00000604296 328 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC106782.7-201ENST00000624024 418 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 AC133555.5-201ENST00000624430 418 ntBASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
C9orf40Q8IXQ3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 MRPS17P1-201ENST00000596009 3130 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RN7SKP191-201ENST00000364713 306 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 DUTP4-201ENST00000424782 475 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC083855.1-201ENST00000440041 258 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 PGBD4P1-201ENST00000473644 407 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RN7SL350P-201ENST00000492591 299 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RPL23AP80-201ENST00000495605 424 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 SNX18P23-201ENST00000510867 677 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC093878.1-201ENST00000515630 432 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AL591767.3-201ENST00000554632 525 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms