Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RN7SL270P-201ENST00000579643 281 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 AL390877.1-201ENST00000605704 214 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 MIR7854-201ENST00000620068 65 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 AC007603.3-201ENST00000636915 979 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 AL354702.2-202ENST00000641481 890 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 AC011379.1-201ENST00000508713 3025 ntBASIC8.2□□□□□ -1.1
PDS5AQ29RF7 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDS5AQ29RF7 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 RNA5SP140-201ENST00000364524 92 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 RNA5SP85-201ENST00000365378 119 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 RN7SKP38-201ENST00000410782 309 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 PSMC1P2-201ENST00000423961 1204 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 COL11A2P1-205ENST00000441798 676 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 OR13C1P-201ENST00000457612 963 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC015524.1-201ENST00000491585 472 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 ANP32BP1-202ENST00000568553 737 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC245052.7-201ENST00000601161 359 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC091768.1-201ENST00000609258 930 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC068726.1-201ENST00000610993 341 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 MIR6823-201ENST00000622118 61 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 PSMC1P6-201ENST00000477233 1319 ntBASIC8.19□□□□□ -1.1
PDS5AQ29RF7 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.19□□□□□ -1.1
PDS5AQ29RF7 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AC098614.1-202ENST00000634895 1830 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 CYCSP17-201ENST00000407870 315 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AL663061.1-201ENST00000416625 580 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RPL7AP23-201ENST00000482625 776 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RN7SL568P-201ENST00000493069 298 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AP001000.1-201ENST00000526843 742 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RN7SL199P-201ENST00000578752 281 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RN7SL656P-201ENST00000579044 281 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 RN7SL404P-201ENST00000582421 281 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AC012175.1-201ENST00000603755 531 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 AC183089.2-201ENST00000637931 916 ntBASIC8.18□□□□□ -1.1
PDS5AQ29RF7 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.18□□□□□ -1.1
PDS5AQ29RF7 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDS5AQ29RF7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms