Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 AC079594.1-201ENST00000489757 331 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC018639.1-201ENST00000492994 442 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.37□□□□□ -1.23
NEK3P51956 AC146944.3-201ENST00000509969 371 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC027801.3-201ENST00000515049 698 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.37□□□□□ -1.23
NEK3P51956 NDUFA3P2-201ENST00000531434 232 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.37□□□□□ -1.23
NEK3P51956 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.37□□□□□ -1.23
NEK3P51956 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.37□□□□□ -1.23
NEK3P51956 FAM60CP-201ENST00000591086 664 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC010463.3-201ENST00000594077 500 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AL512430.4-201ENST00000603085 613 ntBASIC7.37□□□□□ -1.23
NEK3P51956 AC024085.1-201ENST00000604299 432 ntBASIC7.37□□□□□ -1.23
NEK3P51956 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.37□□□□□ -1.23
NEK3P51956 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.37□□□□□ -1.23
NEK3P51956 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NEK3P51956 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NEK3P51956 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 LPAL2-203ENST00000454031 2498 ntBASIC7.37□□□□□ -1.23
NEK3P51956 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.37□□□□□ -1.23
NEK3P51956 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.36□□□□□ -1.23
NEK3P51956 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 OFD1P17-201ENST00000437639 3018 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 NBPF8-201ENST00000583271 5330 ntBASIC7.36□□□□□ -1.23
NEK3P51956 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NEK3P51956 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NEK3P51956 NPM1P14-201ENST00000343743 866 ntBASIC7.36□□□□□ -1.23
NEK3P51956 RNA5SP302-201ENST00000364896 100 ntBASIC7.36□□□□□ -1.23
NEK3P51956 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 MIR27A-201ENST00000385073 78 ntBASIC7.36□□□□□ -1.23
NEK3P51956 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NEK3P51956 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NEK3P51956 AL607077.1-201ENST00000401718 499 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AL139135.1-201ENST00000412675 209 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NEK3P51956 AC114878.1-201ENST00000441166 358 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AL161626.1-201ENST00000441480 490 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 RPL36AP55-201ENST00000454114 305 ntBASIC7.36□□□□□ -1.23
NEK3P51956 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
NEK3P51956 HESX1-202ENST00000473921 757 ntTSL 5 BASIC7.36□□□□□ -1.23
NEK3P51956 RPL7AP30-201ENST00000482859 796 ntBASIC7.36□□□□□ -1.23
NEK3P51956 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 AP003168.1-201ENST00000530091 307 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 AC023080.1-201ENST00000551663 931 ntBASIC7.36□□□□□ -1.23
NEK3P51956 FAM30C-201ENST00000561158 410 ntBASIC7.36□□□□□ -1.23
NEK3P51956 MIR5010-201ENST00000582846 120 ntBASIC7.36□□□□□ -1.23
NEK3P51956 MIR3159-201ENST00000584572 74 ntBASIC7.36□□□□□ -1.23
NEK3P51956 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.36□□□□□ -1.23
NEK3P51956 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.36□□□□□ -1.23
NEK3P51956 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.36□□□□□ -1.23
NEK3P51956 KATNBL1P1-201ENST00000605192 748 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC113361.1-201ENST00000606683 543 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.36□□□□□ -1.23
NEK3P51956 AL161931.1-201ENST00000612768 246 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC078909.2-201ENST00000620584 398 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AL121985.3-201ENST00000620690 523 ntBASIC7.36□□□□□ -1.23
NEK3P51956 AC243725.1-201ENST00000637164 436 ntBASIC7.36□□□□□ -1.23
NEK3P51956 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
NEK3P51956 AL139254.3-201ENST00000641097 674 ntBASIC7.36□□□□□ -1.23
NEK3P51956 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.36□□□□□ -1.23
NEK3P51956 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NEK3P51956 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
NEK3P51956 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 AC078880.4-201ENST00000617627 1749 ntBASIC7.35□□□□□ -1.23
NEK3P51956 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms