Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL592504.1-201ENST00000605319 439 ntBASIC7.45□□□□□ -1.22
SSR1P43307 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.45□□□□□ -1.22
SSR1P43307 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SSR1P43307 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SSR1P43307 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.45□□□□□ -1.22
SSR1P43307 AL139254.2-202ENST00000641937 1156 ntBASIC7.45□□□□□ -1.22
SSR1P43307 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.45□□□□□ -1.22
SSR1P43307 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
SSR1P43307 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SSR1P43307 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.45□□□□□ -1.22
SSR1P43307 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SSR1P43307 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.45□□□□□ -1.22
SSR1P43307 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
SSR1P43307 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SSR1P43307 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
SSR1P43307 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.45□□□□□ -1.22
SSR1P43307 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.45□□□□□ -1.22
SSR1P43307 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.45□□□□□ -1.22
SSR1P43307 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SSR1P43307 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.44□□□□□ -1.22
SSR1P43307 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SSR1P43307 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.44□□□□□ -1.22
SSR1P43307 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 TATDN2P3-201ENST00000452855 3665 ntBASIC7.44□□□□□ -1.22
SSR1P43307 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SSR1P43307 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 RPL10P16-201ENST00000325000 645 ntBASIC7.44□□□□□ -1.22
SSR1P43307 FAM204BP-201ENST00000369171 701 ntBASIC7.44□□□□□ -1.22
SSR1P43307 MIR199B-201ENST00000384849 110 ntBASIC7.44□□□□□ -1.22
SSR1P43307 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
SSR1P43307 RPL7AP14-201ENST00000424041 802 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AL034399.1-201ENST00000451535 380 ntBASIC7.44□□□□□ -1.22
SSR1P43307 SETP4-201ENST00000455717 868 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.44□□□□□ -1.22
SSR1P43307 AC131233.1-201ENST00000479200 955 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.44□□□□□ -1.22
SSR1P43307 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.44□□□□□ -1.22
SSR1P43307 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 RN7SL311P-201ENST00000579858 306 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.44□□□□□ -1.22
SSR1P43307 AC027271.1-201ENST00000610270 610 ntBASIC7.44□□□□□ -1.22
SSR1P43307 PART1_3.1-201ENST00000619680 131 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AC127071.1-201ENST00000624997 712 ntBASIC7.44□□□□□ -1.22
SSR1P43307 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.44□□□□□ -1.22
SSR1P43307 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 AL591848.4-201ENST00000567832 3472 ntBASIC7.44□□□□□ -1.22
SSR1P43307 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
SSR1P43307 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.44□□□□□ -1.22
SSR1P43307 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SSR1P43307 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.43□□□□□ -1.22
SSR1P43307 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.43□□□□□ -1.22
SSR1P43307 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 RN7SKP62-201ENST00000384539 329 ntBASIC7.43□□□□□ -1.22
SSR1P43307 MIR640-201ENST00000385086 96 ntBASIC7.43□□□□□ -1.22
SSR1P43307 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.43□□□□□ -1.22
SSR1P43307 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.43□□□□□ -1.22
SSR1P43307 AC093107.1-201ENST00000422772 609 ntBASIC7.43□□□□□ -1.22
SSR1P43307 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.43□□□□□ -1.22
SSR1P43307 RN7SL834P-201ENST00000461450 286 ntBASIC7.43□□□□□ -1.22
SSR1P43307 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.43□□□□□ -1.22
SSR1P43307 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SSR1P43307 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.43□□□□□ -1.22
SSR1P43307 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.43□□□□□ -1.22
SSR1P43307 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.43□□□□□ -1.22
SSR1P43307 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.43□□□□□ -1.22
SSR1P43307 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.43□□□□□ -1.22
SSR1P43307 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.43□□□□□ -1.22
SSR1P43307 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.43□□□□□ -1.22
SSR1P43307 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms