Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CPS1P31327 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CPS1P31327 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CPS1P31327 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CPS1P31327 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC9.54□□□□□ -0.88
CPS1P31327 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC9.54□□□□□ -0.88
CPS1P31327 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 MTCO1P28-201ENST00000574177 1528 ntBASIC9.54□□□□□ -0.88
CPS1P31327 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC9.54□□□□□ -0.88
CPS1P31327 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CPS1P31327 SUGT1P2-201ENST00000379452 992 ntBASIC9.54□□□□□ -0.88
CPS1P31327 OSTCP4-201ENST00000424397 449 ntBASIC9.54□□□□□ -0.88
CPS1P31327 GTF3AP6-201ENST00000432585 986 ntBASIC9.54□□□□□ -0.88
CPS1P31327 GAPDHP33-201ENST00000443168 1013 ntBASIC9.54□□□□□ -0.88
CPS1P31327 RPL7L1P11-201ENST00000446092 721 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AP002453.1-201ENST00000492327 668 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 MTND6P16-201ENST00000504006 520 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AL133399.1-201ENST00000527476 298 ntBASIC9.54□□□□□ -0.88
CPS1P31327 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC9.54□□□□□ -0.88
CPS1P31327 AC027544.3-201ENST00000535082 757 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC9.54□□□□□ -0.88
CPS1P31327 AC090651.1-201ENST00000567865 634 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC9.54□□□□□ -0.88
CPS1P31327 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 MIR6811-201ENST00000620409 58 ntBASIC9.54□□□□□ -0.88
CPS1P31327 MIR6730-201ENST00000622213 67 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AC018692.2-201ENST00000624130 348 ntBASIC9.54□□□□□ -0.88
CPS1P31327 AC026464.2-201ENST00000567834 2421 ntBASIC9.54□□□□□ -0.88
CPS1P31327 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
CPS1P31327 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC9.54□□□□□ -0.88
CPS1P31327 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CPS1P31327 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
CPS1P31327 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CPS1P31327 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CPS1P31327 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC9.53□□□□□ -0.88
CPS1P31327 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 DNAJC19P5-201ENST00000443295 316 ntBASIC9.53□□□□□ -0.88
CPS1P31327 AL161636.2-201ENST00000445179 927 ntBASIC9.53□□□□□ -0.88
CPS1P31327 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC9.53□□□□□ -0.88
CPS1P31327 AC073389.3-201ENST00000609434 935 ntBASIC9.53□□□□□ -0.88
CPS1P31327 AC026367.2-201ENST00000610630 553 ntBASIC9.53□□□□□ -0.88
CPS1P31327 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC9.53□□□□□ -0.88
CPS1P31327 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC9.53□□□□□ -0.88
CPS1P31327 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CPS1P31327 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.53□□□□□ -0.88
CPS1P31327 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CPS1P31327 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC9.53□□□□□ -0.88
CPS1P31327 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC9.53□□□□□ -0.88
CPS1P31327 PSMC1P6-201ENST00000477233 1319 ntBASIC9.53□□□□□ -0.88
CPS1P31327 XRCC6P5-201ENST00000435236 1795 ntBASIC9.52□□□□□ -0.88
CPS1P31327 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CPS1P31327 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC9.52□□□□□ -0.88
CPS1P31327 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
CPS1P31327 RPL21P50-201ENST00000417698 477 ntBASIC9.52□□□□□ -0.88
CPS1P31327 KRTAP2-5P-201ENST00000446109 396 ntBASIC9.52□□□□□ -0.88
CPS1P31327 VN1R38P-201ENST00000450265 887 ntBASIC9.52□□□□□ -0.88
CPS1P31327 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC9.52□□□□□ -0.88
CPS1P31327 PSMA2P2-201ENST00000504319 686 ntBASIC9.52□□□□□ -0.88
CPS1P31327 AC055733.3-201ENST00000505214 523 ntBASIC9.52□□□□□ -0.88
CPS1P31327 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC9.52□□□□□ -0.88
CPS1P31327 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC9.52□□□□□ -0.88
CPS1P31327 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC9.52□□□□□ -0.88
CPS1P31327 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC9.52□□□□□ -0.88
CPS1P31327 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC9.52□□□□□ -0.88
CPS1P31327 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC9.52□□□□□ -0.88
CPS1P31327 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CPS1P31327 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC9.52□□□□□ -0.88
CPS1P31327 RPSAP75-201ENST00000605848 301 ntBASIC9.52□□□□□ -0.88
CPS1P31327 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC9.52□□□□□ -0.88
CPS1P31327 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
CPS1P31327 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CPS1P31327 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CPS1P31327 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CPS1P31327 AL451064.2-201ENST00000623514 1654 ntBASIC9.52□□□□□ -0.89
CPS1P31327 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC9.52□□□□□ -0.89
CPS1P31327 AF121897.1-201ENST00000411867 3980 ntBASIC9.52□□□□□ -0.89
CPS1P31327 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CPS1P31327 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
CPS1P31327 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CPS1P31327 SFTPD-AS1-201ENST00000608229 5001 ntBASIC9.52□□□□□ -0.89
CPS1P31327 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CPS1P31327 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms