Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SOX5-213ENST00000541847 758 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC144548.1-201ENST00000549577 324 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.24□□□□□ -1.57
CXCL1P09341 EEF1B2P1-201ENST00000567221 672 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC136944.5-201ENST00000573021 151 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 PRR13P5-201ENST00000596581 442 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 AC018737.1-201ENST00000603900 204 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CXCL1P09341 MIR6754-201ENST00000621121 66 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.24□□□□□ -1.57
CXCL1P09341 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 AC119674.1-213ENST00000641177 1386 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 AC025470.1-201ENST00000510053 2032 ntBASIC5.24□□□□□ -1.57
CXCL1P09341 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CXCL1P09341 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CXCL1P09341 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CXCL1P09341 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 RN7SKP107-201ENST00000364157 290 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 FAM204BP-201ENST00000369171 701 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 IGLC6-201ENST00000410078 317 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 CTSLP8-201ENST00000413075 967 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 MRPS21P2-201ENST00000424704 264 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL1P09341 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL1P09341 AC009108.1-201ENST00000473913 796 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 RPL12P5-201ENST00000475149 392 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 ACTG1P20-201ENST00000486001 468 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 RN7SL124P-201ENST00000498656 285 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AF186996.3-201ENST00000509527 964 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL1P09341 AC114810.1-201ENST00000607415 473 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AC006335.3-201ENST00000613408 292 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AC243830.2-201ENST00000618067 630 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AL354718.1-201ENST00000619764 589 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AC106795.5-201ENST00000623288 454 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.23□□□□□ -1.57
CXCL1P09341 AL590396.3-201ENST00000636334 300 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.23□□□□□ -1.57
CXCL1P09341 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 MAPK10-379ENST00000642013 1385 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 AC130360.2-201ENST00000533477 1556 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.23□□□□□ -1.57
CXCL1P09341 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.23□□□□□ -1.57
CXCL1P09341 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CXCL1P09341 LINC01616-201ENST00000561816 2280 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC010624.4-201ENST00000597606 1351 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 RNA5SP263-201ENST00000363376 128 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms