Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNX29P2-204ENST00000603801 875 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 AC063962.1-201ENST00000608199 521 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 AC027559.1-201ENST00000636288 271 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 SPATA31C1-201ENST00000420021 3895 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.34□□□□□ -1.39
SPTA1P02549 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 AL391988.1-201ENST00000614747 1553 ntBASIC6.34□□□□□ -1.39
SPTA1P02549 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SPTA1P02549 AC061975.5-201ENST00000584928 1441 ntBASIC6.34□□□□□ -1.4
SPTA1P02549 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SPTA1P02549 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SPTA1P02549 RNA5SP140-201ENST00000364524 92 ntBASIC6.34□□□□□ -1.4
SPTA1P02549 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SPTA1P02549 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SPTA1P02549 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.34□□□□□ -1.4
SPTA1P02549 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SPTA1P02549 RPL36P1-201ENST00000419720 225 ntBASIC6.34□□□□□ -1.4
SPTA1P02549 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.34□□□□□ -1.4
SPTA1P02549 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.34□□□□□ -1.4
SPTA1P02549 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.34□□□□□ -1.4
SPTA1P02549 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.34□□□□□ -1.4
SPTA1P02549 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.34□□□□□ -1.4
SPTA1P02549 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.34□□□□□ -1.4
SPTA1P02549 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.34□□□□□ -1.4
SPTA1P02549 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.34□□□□□ -1.4
SPTA1P02549 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.34□□□□□ -1.4
SPTA1P02549 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.34□□□□□ -1.4
SPTA1P02549 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.34□□□□□ -1.4
SPTA1P02549 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SPTA1P02549 AC068733.1-202ENST00000531479 2456 ntBASIC6.34□□□□□ -1.4
SPTA1P02549 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 ST5-237ENST00000530991 3396 ntTSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SPTA1P02549 COL6A4P1-202ENST00000487147 4317 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 LINC01613-201ENST00000561476 2780 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 AC145138.1-201ENST00000512908 2851 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SPTA1P02549 UBBP1-201ENST00000392399 473 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.33□□□□□ -1.4
SPTA1P02549 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 AL954705.1-201ENST00000435277 559 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.33□□□□□ -1.4
SPTA1P02549 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.33□□□□□ -1.4
SPTA1P02549 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.33□□□□□ -1.4
SPTA1P02549 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 OR4C7P-201ENST00000533375 919 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 AC007225.2-201ENST00000562529 256 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 RN7SL366P-201ENST00000577957 292 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.33□□□□□ -1.4
SPTA1P02549 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 MAPK10-281ENST00000641170 3070 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPTA1P02549 FUNDC2P3-201ENST00000334716 533 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 PSPC1P2-201ENST00000455130 225 ntBASIC6.33□□□□□ -1.4
SPTA1P02549 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.33□□□□□ -1.4
SPTA1P02549 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.33□□□□□ -1.4
SPTA1P02549 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC6.33□□□□□ -1.4
SPTA1P02549 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SPTA1P02549 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.32□□□□□ -1.4
SPTA1P02549 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPTA1P02549 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms