Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 AL022334.1-201ENST00000417397 1726 ntBASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 CALCOCO2-203ENST00000416445 1438 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01558Q9Y6Z2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC083899.1-201ENST00000454465 3819 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AL078621.1-201ENST00000272567 768 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SKP107-201ENST00000364157 290 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC121334.1-201ENST00000396414 802 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AL032822.1-201ENST00000405827 1063 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 SNORD3J-201ENST00000408473 190 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 METTL15P3-201ENST00000415522 1221 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01871-201ENST00000417930 243 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC006455.7-201ENST00000422502 392 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 SPTLC1P4-201ENST00000435997 260 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 RPS19P6-201ENST00000441327 433 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01598-202ENST00000445151 719 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC012512.1-201ENST00000446594 718 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 OR2AI1P-201ENST00000448534 932 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AL683807.2-201ENST00000453953 548 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 BUB3P1-201ENST00000458451 999 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 KCNAB1-AS2-201ENST00000473876 538 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC015820.1-201ENST00000473882 321 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 CSTA-202ENST00000479204 821 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SL342P-201ENST00000479616 294 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SL745P-201ENST00000484900 299 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 GGTA1P-204ENST00000488429 1104 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SL346P-201ENST00000491561 294 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC055733.1-201ENST00000506407 572 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 GAPDHP71-201ENST00000511530 1003 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC02056-203ENST00000512573 594 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC139713.1-201ENST00000515019 321 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 SNX18P27-201ENST00000523611 779 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ARL6IP1P3-201ENST00000524544 560 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 SCAND2P-204ENST00000541103 669 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC127381.1-201ENST00000555979 939 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 APOOP5-202ENST00000564761 566 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 ZNF322P1-201ENST00000568013 1209 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC002551.1-201ENST00000569881 592 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AL121928.1-201ENST00000608017 521 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 OR6L2P-201ENST00000608207 925 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC008993.1-201ENST00000632280 776 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 CASC19-228ENST00000641414 1684 ntBASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01558Q9Y6Z2 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms