Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX3Q99909 AC023310.2-201ENST00000553844 547 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX3Q99909 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 EXOSC3P2-201ENST00000594464 497 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX3Q99909 U47924.1-201ENST00000606539 434 ntBASIC6.02□□□□□ -1.45
SSX3Q99909 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX3Q99909 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX3Q99909 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SSX3Q99909 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 RBMX2P2-201ENST00000257020 946 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSX3Q99909 SNORA81-201ENST00000408493 178 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 RNA5SP231-201ENST00000410496 138 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AL355862.1-201ENST00000412705 353 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 EEF1GP7-201ENST00000422983 703 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 SETP9-201ENST00000423837 832 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 GAPDHP51-201ENST00000426454 1000 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 BZW1P1-201ENST00000454901 1240 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 RN7SL688P-201ENST00000471754 275 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC008799.2-201ENST00000484429 647 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 MRPL57P6-201ENST00000506570 309 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 AC016559.1-201ENST00000511420 199 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 RN7SKP5-201ENST00000517045 272 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 AP005597.2-201ENST00000526238 341 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 AL132640.2-202ENST00000559732 614 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 FRG2IP-201ENST00000563581 781 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 AC024614.1-201ENST00000577546 307 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AP006587.6-201ENST00000582128 1091 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC090774.2-201ENST00000584708 322 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX3Q99909 SNORA43.5-201ENST00000631270 138 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AC073488.7-201ENST00000633785 778 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX3Q99909 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX3Q99909 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.01□□□□□ -1.45
SSX3Q99909 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSX3Q99909 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX3Q99909 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
SSX3Q99909 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX3Q99909 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSX3Q99909 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 HSPA8P11-201ENST00000508840 1898 ntBASIC6□□□□□ -1.45
SSX3Q99909 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6□□□□□ -1.45
SSX3Q99909 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 AC127070.3-201ENST00000503695 3263 ntBASIC6□□□□□ -1.45
SSX3Q99909 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 AC012078.1-201ENST00000405035 1646 ntBASIC6□□□□□ -1.45
SSX3Q99909 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX3Q99909 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms