Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 RNA5SP472-201ENST00000363868 119 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 RPS3AP5-201ENST00000389400 821 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 MEG8-201ENST00000414488 800 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 FTLP17-201ENST00000432567 525 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 RN7SL518P-201ENST00000491887 280 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 RNU6-362P-201ENST00000516736 90 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 SSU72P6-201ENST00000532644 488 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 AL356585.10-201ENST00000641883 123 ntBASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.46□□□□□ -1.05
CHMP4CQ96CF2 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4CQ96CF2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.46□□□□□ -1.05
CHMP4CQ96CF2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
CHMP4CQ96CF2 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CHMP4CQ96CF2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 RNU6-1055P-201ENST00000391085 107 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 PRDX1P1-201ENST00000449329 596 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 EAF2-202ENST00000451944 960 ntTSL 2 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 RN7SL88P-201ENST00000480166 299 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 PGAM4P2-201ENST00000512491 721 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 OR7E161P-201ENST00000533722 967 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 PDCL3P1-201ENST00000534575 734 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 EIF1AXP2-201ENST00000555940 413 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 ULK4P1-202ENST00000565174 503 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC010615.3-201ENST00000597319 394 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC023513.1-201ENST00000604396 691 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 AC138915.4-201ENST00000565549 4147 ntBASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.46□□□□□ -1.06
CHMP4CQ96CF2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 OR5AQ1P-202ENST00000641257 1534 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 OR5AQ1P-203ENST00000641818 1529 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 FAUP2-201ENST00000394301 401 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 DUTP4-201ENST00000424782 475 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AL354893.1-201ENST00000433735 348 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 PHB2P1-201ENST00000434943 890 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 ANXA2P2-201ENST00000435128 1020 ntBASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.45□□□□□ -1.06
CHMP4CQ96CF2 FCF1P7-201ENST00000451185 558 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms