Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CCAT2-201ENST00000630920 1752 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 EIF4A1P13-201ENST00000415667 230 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC109638.1-201ENST00000417406 326 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC105052.2-201ENST00000434317 794 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 RPL21P33-201ENST00000444831 484 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 PSMA6P2-201ENST00000457574 686 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC096743.1-201ENST00000485172 319 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC079594.1-201ENST00000489757 331 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC026951.2-201ENST00000613847 241 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 MKI67P1-201ENST00000604297 1460 ntBASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC50Q8IVM0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AP003486.1-201ENST00000525716 3994 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 RNA5SP333-201ENST00000363466 118 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 RNA5SP334-201ENST00000364825 118 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 MIR152-201ENST00000385212 87 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC093107.1-201ENST00000422772 609 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AL604028.2-201ENST00000437848 788 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 ST13P2-201ENST00000438916 1109 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 WBP1LP1-201ENST00000460451 896 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 RPL34P34-201ENST00000465389 354 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 RN7SL392P-201ENST00000473024 299 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 RN7SL445P-201ENST00000495609 293 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 OR9L1P-201ENST00000529493 933 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 ACTG1P15-201ENST00000570019 1063 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 MIR5705-201ENST00000579870 89 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC061975.3-201ENST00000583209 244 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC015818.6-201ENST00000584274 634 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC006116.6-201ENST00000593258 1103 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC016542.3-201ENST00000623520 619 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 AC022034.1-201ENST00000512867 2156 ntBASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
CCDC50Q8IVM0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AC007159.1-201ENST00000566529 4706 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms