Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC079178.2-201ENST00000439323 1624 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 CASC19-238ENST00000641523 1558 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC110926.1-201ENST00000412499 2825 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AL606490.2-201ENST00000457562 1330 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 RNA5SP448-201ENST00000363151 111 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 RPL5P8-201ENST00000396820 815 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 RN7SKP161-201ENST00000411110 305 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 RBMY2GP-201ENST00000418671 1034 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AL049610.1-201ENST00000423374 372 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC009362.1-201ENST00000427253 406 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC105052.2-201ENST00000434317 794 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 RBMY2NP-201ENST00000434454 1028 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC245452.2-201ENST00000435222 392 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 MTND4LP16-201ENST00000440828 295 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC003071.1-201ENST00000451219 789 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC005165.2-201ENST00000466070 380 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC068724.1-201ENST00000487100 792 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC113430.1-201ENST00000506872 718 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 OR4C1P-201ENST00000530880 937 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 MARK3P1-201ENST00000604796 643 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC135050.6-202ENST00000613584 392 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 MIR1264-201ENST00000616374 69 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC009878.1-201ENST00000621819 340 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 AC010533.1-201ENST00000624875 2105 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 OR5AK4P-201ENST00000635912 903 ntBASIC9.15□□□□□ -0.94
ALDH1A1P00352 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC9.15□□□□□ -0.94
ALDH1A1P00352 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
ALDH1A1P00352 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
ALDH1A1P00352 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.15□□□□□ -0.95
ALDH1A1P00352 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC9.15□□□□□ -0.95
ALDH1A1P00352 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALDH1A1P00352 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
ALDH1A1P00352 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC9.15□□□□□ -0.95
ALDH1A1P00352 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.15□□□□□ -0.95
ALDH1A1P00352 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC9.15□□□□□ -0.95
ALDH1A1P00352 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALDH1A1P00352 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
ALDH1A1P00352 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
ALDH1A1P00352 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 AL158152.1-201ENST00000602652 1435 ntBASIC9.14□□□□□ -0.95
ALDH1A1P00352 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC9.14□□□□□ -0.95
ALDH1A1P00352 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
ALDH1A1P00352 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
ALDH1A1P00352 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 SNX19P1-201ENST00000444901 2981 ntBASIC9.14□□□□□ -0.95
ALDH1A1P00352 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
ALDH1A1P00352 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC9.14□□□□□ -0.95
ALDH1A1P00352 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
ALDH1A1P00352 OR4G2P-201ENST00000328113 903 ntBASIC9.14□□□□□ -0.95
ALDH1A1P00352 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
ALDH1A1P00352 RNVU1-15-201ENST00000384476 165 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms