Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC099654.3-201ENST00000447087 1546 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC010329.1-201ENST00000593903 8328 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RPS2P45-201ENST00000469997 2057 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RPSAP44-201ENST00000406712 884 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 TYMSP1-201ENST00000407851 869 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SKP271-201ENST00000410528 320 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RNU2-5P-201ENST00000410533 180 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 VN1R66P-201ENST00000412929 916 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RPSAP1-201ENST00000421328 880 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 VDAC2P3-201ENST00000430995 828 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 CDK7P1-201ENST00000434574 693 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC011742.2-201ENST00000443818 352 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RPL21P33-201ENST00000444831 484 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 SNORA81.1-201ENST00000458922 177 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SL392P-201ENST00000473024 299 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SL306P-201ENST00000492941 296 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 OR10J9P-201ENST00000511932 987 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC111000.1-201ENST00000514545 713 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 OR5M4P-201ENST00000529436 925 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC023827.2-201ENST00000566880 1061 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 PRELID3BP3-201ENST00000584963 545 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC139493.1-201ENST00000604368 397 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AL136139.1-201ENST00000605568 222 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC104117.5-201ENST00000606195 547 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC004839.1-201ENST00000610269 501 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC016542.2-201ENST00000624201 619 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 OR7E161P-202ENST00000641994 1033 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AL161901.1-201ENST00000624954 3425 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC090220.1-201ENST00000593078 1699 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 MROH3P-201ENST00000435735 2676 ntBASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RHBDD3Q9Y3P4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 TPTE2P2-201ENST00000403471 1466 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC105114.1-201ENST00000624795 1862 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC090114.1-201ENST00000393266 448 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 NHP2P2-201ENST00000396362 460 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SKP236-201ENST00000410635 284 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 RBMY2JP-201ENST00000425544 1059 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AF274573.1-201ENST00000430535 494 ntBASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDD3Q9Y3P4 AC009237.4-201ENST00000441078 238 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms