Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RNA5SP382-201ENST00000363355 112 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 SPATA20P1-201ENST00000423089 438 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC000089.1-201ENST00000424559 801 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC091390.2-201ENST00000432573 374 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RBMY3AP-201ENST00000449381 1145 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RN7SL834P-201ENST00000461450 286 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RPS26P11-201ENST00000463445 348 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RPS3AP49-201ENST00000472161 790 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RPS26P6-201ENST00000475156 348 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC093878.1-201ENST00000515630 432 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 RN7SKP64-201ENST00000517206 328 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AP005902.2-201ENST00000518393 307 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 EEF1B2P2-201ENST00000519625 676 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC020914.7-201ENST00000594477 545 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC005479.3-201ENST00000602790 431 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 MIR6813-201ENST00000621638 56 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC005858.3-201ENST00000624756 589 ntBASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HMG20BQ9P0W2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 RPL9P21-201ENST00000392269 505 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 RPSAP60-201ENST00000415403 880 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 FAM183DP-201ENST00000421987 399 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AL121578.2-201ENST00000448797 447 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC022080.2-201ENST00000452932 533 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 RN7SL612P-201ENST00000497704 295 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 RPL5P11-201ENST00000498068 893 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC095057.1-201ENST00000507583 168 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 RNA5SP278-201ENST00000517055 102 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 IGKV2D-38-201ENST00000518423 240 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 CHEK2P2-201ENST00000554701 672 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AL034417.4-202ENST00000642135 2236 ntBASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HMG20BQ9P0W2 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 MAPK10-379ENST00000642013 1385 ntBASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 AC092701.1-201ENST00000623627 1551 ntBASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 SNORA70G-201ENST00000383923 142 ntBASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.37□□□□□ -1.07
HMG20BQ9P0W2 MTND6P1-201ENST00000417434 424 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms