Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 RPS10P14-201ENST00000440748 502 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 RSL24D1P2-201ENST00000445584 366 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 CEACAMP5-201ENST00000448037 961 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 RBMY2EP-202ENST00000456360 940 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC008417.1-201ENST00000510014 565 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 OR7E154P-201ENST00000525174 932 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC126177.6-201ENST00000550420 1009 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AL109628.1-201ENST00000556877 366 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 RPSAP66-201ENST00000592196 606 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AL512430.4-201ENST00000603085 613 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC012640.3-201ENST00000607847 430 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 MIR8082-201ENST00000612488 81 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC009283.1-201ENST00000615852 645 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC092725.2-201ENST00000567658 1389 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 U3.48-201ENST00000363172 216 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 RNU6-1017P-201ENST00000363613 106 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC008171.1-201ENST00000395058 200 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 NPM1P10-201ENST00000398310 865 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AL161742.1-201ENST00000418154 584 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 SLAMF6P1-201ENST00000451067 602 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 TREML3P-201ENST00000457327 501 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 RN7SL797P-201ENST00000486314 297 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC026826.1-201ENST00000493002 361 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC122714.1-201ENST00000502510 459 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PABPC1P1-201ENST00000506347 591 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC093325.1-201ENST00000508378 326 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 OR4A1P-201ENST00000532342 920 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC103968.1-201ENST00000557841 573 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 EEF1B2P1-201ENST00000567221 672 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 MIR378H-201ENST00000579966 83 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 MIR4470-201ENST00000583453 72 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AL031777.2-201ENST00000611953 196 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PTCHD3P1-201ENST00000612350 537 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 MIR6883-201ENST00000614952 78 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC117503.3-201ENST00000623811 601 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 CFTRP2-201ENST00000634304 199 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 AC183089.2-201ENST00000637931 916 ntBASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.48□□□□□ -1.05
CHMP4CQ96CF2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
CHMP4CQ96CF2 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms