Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 MIR3135A-201ENST00000578460 77 ntBASIC8.27□□□□□ -1.09
SNED1Q8TER0 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 AP002345.2-201ENST00000609961 904 ntBASIC8.27□□□□□ -1.09
SNED1Q8TER0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNED1Q8TER0 AC114546.4-201ENST00000624413 369 ntBASIC8.27□□□□□ -1.09
SNED1Q8TER0 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 BRD7P1-201ENST00000557705 1915 ntBASIC8.27□□□□□ -1.09
SNED1Q8TER0 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SNED1Q8TER0 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 AC009948.5-201ENST00000624360 4406 ntBASIC8.27□□□□□ -1.09
SNED1Q8TER0 AL035555.1-201ENST00000404462 1790 ntBASIC8.27□□□□□ -1.09
SNED1Q8TER0 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AC108479.1-201ENST00000431142 427 ntBASIC8.26□□□□□ -1.09
SNED1Q8TER0 AC069154.1-201ENST00000432914 542 ntBASIC8.26□□□□□ -1.09
SNED1Q8TER0 AC055733.3-201ENST00000505214 523 ntBASIC8.26□□□□□ -1.09
SNED1Q8TER0 UGT2A3P7-201ENST00000510485 734 ntBASIC8.26□□□□□ -1.09
SNED1Q8TER0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 NANOGNBP2-201ENST00000544753 553 ntBASIC8.26□□□□□ -1.09
SNED1Q8TER0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 MIR4701-201ENST00000583094 63 ntBASIC8.26□□□□□ -1.09
SNED1Q8TER0 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNED1Q8TER0 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.26□□□□□ -1.09
SNED1Q8TER0 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 RN7SKP62-201ENST00000384539 329 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 RPL9P21-201ENST00000392269 505 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 HMGN1P6-201ENST00000438508 291 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 ZNF519P4-201ENST00000514008 125 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 ANP32BP1-202ENST00000568553 737 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC010327.2-201ENST00000587647 488 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC010463.3-201ENST00000594077 500 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 AP001052.1-201ENST00000626421 99 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 AL357140.4-201ENST00000636827 412 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.25□□□□□ -1.09
SNED1Q8TER0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 AC009135.2-201ENST00000624136 1768 ntBASIC8.25□□□□□ -1.09
SNED1Q8TER0 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNED1Q8TER0 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC124045.1-201ENST00000606008 1953 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC096992.2-201ENST00000609553 1684 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 RPL11P4-201ENST00000332269 436 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.24□□□□□ -1.09
SNED1Q8TER0 RNA5SP435-201ENST00000364044 108 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 AC003045.1-201ENST00000398779 713 ntBASIC8.24□□□□□ -1.09
SNED1Q8TER0 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms