Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL583832.1-201ENST00000603227 784 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 BX005195.1-201ENST00000618097 1198 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 AC078909.2-201ENST00000620584 398 ntBASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71LQ8N9Z2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC106872.6-201ENST00000514228 1346 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC005618.1-201ENST00000606901 3148 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 FAM32BP-201ENST00000344033 333 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AL390039.1-201ENST00000399148 611 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RN7SKP188-201ENST00000410789 317 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RN7SKP85-201ENST00000411349 318 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 VN1R33P-201ENST00000411800 887 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC017104.2-201ENST00000417000 321 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AL590399.4-201ENST00000436561 601 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 PSMA6P2-201ENST00000457574 686 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RPL34P34-201ENST00000465389 354 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RN7SL621P-201ENST00000472565 299 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RN7SL702P-201ENST00000488394 292 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC127024.1-201ENST00000490847 418 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AL135978.1-201ENST00000553618 1266 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 MIR5192-201ENST00000579892 92 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AL023806.2-201ENST00000603042 263 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AL359704.2-201ENST00000604335 521 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC091193.1-201ENST00000604640 448 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 FXYD6P1-201ENST00000604857 285 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC010333.3-201ENST00000615100 402 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC110769.3-201ENST00000624567 1173 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC127071.1-201ENST00000624997 712 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AP000550.3-201ENST00000637734 379 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC011471.4-201ENST00000638271 216 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AC022905.1-201ENST00000503430 3048 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 AL359694.2-201ENST00000567753 1615 ntBASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC71LQ8N9Z2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 AP000547.3-204ENST00000588548 2523 ntBASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 OR2M1P-201ENST00000318104 951 ntBASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 AC121334.1-201ENST00000396414 802 ntBASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 RN7SKP168-201ENST00000410910 300 ntBASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 MTND4LP17-201ENST00000414607 293 ntBASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 PPIAP30-201ENST00000415473 519 ntBASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC71LQ8N9Z2 AC013429.1-201ENST00000456604 422 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms