Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 MYL6P3-201ENST00000436904 432 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 AL136981.1-203ENST00000451452 3844 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AL390728.3-201ENST00000452704 270 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 SCDP1-201ENST00000455244 1081 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 PGBD4P1-201ENST00000473644 407 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 RN7SL379P-201ENST00000479912 293 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC026826.1-201ENST00000493002 361 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 RPL10P7-201ENST00000495649 625 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 SUMO2P7-201ENST00000511179 285 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 IGLC4-201ENST00000517690 248 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 AP004607.5-201ENST00000532034 217 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.22□□□□□ -1.41
H3F3AP84243 AL132640.1-201ENST00000559594 619 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC126323.4-201ENST00000566935 234 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 RN7SL657P-201ENST00000582431 293 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 AC011447.2-201ENST00000592921 283 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 SIGLEC31P-201ENST00000594237 551 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC026951.2-201ENST00000613847 241 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.22□□□□□ -1.41
H3F3AP84243 AP005212.3-201ENST00000619964 528 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC027506.1-201ENST00000621395 198 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.22□□□□□ -1.41
H3F3AP84243 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.22□□□□□ -1.41
H3F3AP84243 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.22□□□□□ -1.41
H3F3AP84243 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.22□□□□□ -1.41
H3F3AP84243 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H3F3AP84243 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 AC092821.3-202ENST00000641304 2767 ntBASIC6.22□□□□□ -1.41
H3F3AP84243 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H3F3AP84243 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
H3F3AP84243 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H3F3AP84243 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.21□□□□□ -1.41
H3F3AP84243 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H3F3AP84243 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.21□□□□□ -1.41
H3F3AP84243 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
H3F3AP84243 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
H3F3AP84243 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 MIR99A-201ENST00000384906 81 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 RNA5SP35-201ENST00000391257 129 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 RPL9P21-201ENST00000392269 505 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 EEF1GP6-201ENST00000402309 905 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AL117344.1-201ENST00000407196 616 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 MTND6P1-201ENST00000417434 424 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 PSMC1P2-201ENST00000423961 1204 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 MTND1P10-201ENST00000426108 832 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H3F3AP84243 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.21□□□□□ -1.42
H3F3AP84243 AL592114.2-201ENST00000440142 532 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC027124.1-201ENST00000440852 466 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.21□□□□□ -1.42
H3F3AP84243 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.21□□□□□ -1.42
H3F3AP84243 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.21□□□□□ -1.42
H3F3AP84243 AC105391.1-201ENST00000503155 1045 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.21□□□□□ -1.42
H3F3AP84243 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.21□□□□□ -1.42
H3F3AP84243 AC087360.1-201ENST00000518788 616 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.21□□□□□ -1.42
H3F3AP84243 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.21□□□□□ -1.42
H3F3AP84243 RN7SL426P-201ENST00000579106 295 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.21□□□□□ -1.42
H3F3AP84243 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.21□□□□□ -1.42
H3F3AP84243 AC099777.1-201ENST00000603779 1070 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC020765.1-201ENST00000604296 328 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC009283.1-201ENST00000615852 645 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC117503.3-201ENST00000623811 601 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AC005753.1-201ENST00000623837 618 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 AP003108.4-201ENST00000623917 878 ntBASIC6.21□□□□□ -1.42
H3F3AP84243 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.21□□□□□ -1.42
H3F3AP84243 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H3F3AP84243 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms