Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AL121985.2-201ENST00000621192 555 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NKX6-1P78426 FGL2-202ENST00000637771 989 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 AL034417.4-202ENST00000642135 2236 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 AC068733.2-201ENST00000605434 1418 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 OOSP1-201ENST00000398992 1270 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC069282.1-201ENST00000411911 526 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 RPS26P4-201ENST00000431743 355 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.62□□□□□ -1.35
NKX6-1P78426 Z99127.2-201ENST00000441426 334 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 TVP23BP2-201ENST00000455082 615 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 RN7SL259P-201ENST00000478499 253 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 AC008629.3-201ENST00000505786 586 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.62□□□□□ -1.35
NKX6-1P78426 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 AC103833.1-201ENST00000517442 172 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.62□□□□□ -1.35
NKX6-1P78426 BTF3P1-201ENST00000522014 495 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 BCAS2P1-201ENST00000528022 632 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 SDHCP4-201ENST00000532834 510 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AP001554.1-201ENST00000604533 376 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC005828.7-201ENST00000607331 556 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AF129408.1-201ENST00000608767 431 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC005156.1-201ENST00000613371 573 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC245389.2-201ENST00000616023 576 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC242843.1-201ENST00000618702 573 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 CTAGE11P-201ENST00000451540 2353 ntBASIC6.62□□□□□ -1.35
NKX6-1P78426 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.62□□□□□ -1.35
NKX6-1P78426 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX6-1P78426 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NKX6-1P78426 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX6-1P78426 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX6-1P78426 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.61□□□□□ -1.35
NKX6-1P78426 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX6-1P78426 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NKX6-1P78426 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX6-1P78426 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms