Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
AP3S2P59780 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.86□□□□□ -1.47
AP3S2P59780 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 AC004656.1-201ENST00000568479 4951 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AL591135.1-201ENST00000401578 5914 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 VEZF1P1-201ENST00000423931 1541 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 NPM1P14-201ENST00000343743 866 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 RNU4-59P-201ENST00000364447 116 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 RN7SKP47-201ENST00000365347 328 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
AP3S2P59780 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC116036.1-201ENST00000412199 367 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AL355862.1-201ENST00000412705 353 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 UQCRHP2-201ENST00000415651 288 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AC017078.1-201ENST00000416146 368 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 RPS17P17-201ENST00000419392 409 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 SNX18P14-201ENST00000429308 574 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC245452.2-201ENST00000435222 392 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AL604028.2-201ENST00000437848 788 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 RPS29P5-201ENST00000452777 171 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AL591866.1-201ENST00000456162 401 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 RPL10P6-201ENST00000457497 318 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 RPL34P34-201ENST00000465389 354 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AL031864.2-201ENST00000498507 350 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 MRPL49P1-201ENST00000505951 535 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC5.85□□□□□ -1.47
AP3S2P59780 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC008677.3-201ENST00000519146 666 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC5.85□□□□□ -1.47
AP3S2P59780 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 OR2AL1P-201ENST00000529862 507 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 Z95115.1-202ENST00000565764 981 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC004232.1-201ENST00000571388 208 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC023389.2-201ENST00000580031 955 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC5.85□□□□□ -1.47
AP3S2P59780 RPS28P1-201ENST00000604589 187 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AL138960.1-201ENST00000613838 513 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 AC025287.2-201ENST00000621911 668 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 AC090373.1-201ENST00000623955 603 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 GAS2-210ENST00000630668 674 ntTSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
AP3S2P59780 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
AP3S2P59780 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AP3S2P59780 AC129502.1-201ENST00000623261 1654 ntBASIC5.85□□□□□ -1.47
AP3S2P59780 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.85□□□□□ -1.47
AP3S2P59780 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC018628.1-201ENST00000624147 3819 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
AP3S2P59780 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC5.84□□□□□ -1.47
AP3S2P59780 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 RNA5SP350-201ENST00000363298 111 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 RNA5SP378-201ENST00000363646 120 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 RNU1-16P-201ENST00000365477 164 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 LCN1P2-201ENST00000372030 223 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms