Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 SMG8-203ENST00000578922 2178 ntBASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 DPP3P2-201ENST00000416030 1696 ntBASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HRH3Q9Y5N1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.37■□□□□ 0.53
HRH3Q9Y5N1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 RPPH1-201ENST00000516869 333 ntBASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 AC092720.2-201ENST00000602388 1665 ntBASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HRH3Q9Y5N1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 AC020907.5-201ENST00000624372 1936 ntBASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 SOX15-203ENST00000570788 1093 ntBASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 RN7SL471P-201ENST00000580476 299 ntBASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 AC006557.6-201ENST00000623071 864 ntBASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HRH3Q9Y5N1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms