Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 AL356652.1-201ENST00000615962 565 ntBASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 RARRES2P4-201ENST00000514074 484 ntBASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 AC133041.1-202ENST00000642053 222 ntBASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB3Q9Y5G1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 AC105036.2-201ENST00000569468 176 ntBASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB3Q9Y5G1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 AC016405.3-201ENST00000607710 860 ntBASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGB3Q9Y5G1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms