Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 AC233723.2-201ENST00000623798 2106 ntBASIC18.85■□□□□ 0.61
LHX6Q9UPM6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 AC117947.1-201ENST00000427448 529 ntBASIC18.85■□□□□ 0.61
LHX6Q9UPM6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 AC116562.2-201ENST00000507042 360 ntBASIC18.85■□□□□ 0.61
LHX6Q9UPM6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 AC006213.4-201ENST00000616184 634 ntBASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.85■□□□□ 0.61
LHX6Q9UPM6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 FAM207BP-201ENST00000447172 505 ntBASIC18.84■□□□□ 0.61
LHX6Q9UPM6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 AC092647.4-201ENST00000457211 535 ntBASIC18.84■□□□□ 0.61
LHX6Q9UPM6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 RNF165-205ENST00000588679 2904 ntBASIC18.84■□□□□ 0.61
LHX6Q9UPM6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LHX6Q9UPM6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
LHX6Q9UPM6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 AC004263.2-201ENST00000617183 678 ntBASIC18.83■□□□□ 0.6
LHX6Q9UPM6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LHX6Q9UPM6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 RNF152P1-201ENST00000397754 604 ntBASIC18.82■□□□□ 0.6
LHX6Q9UPM6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.82■□□□□ 0.6
LHX6Q9UPM6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms