Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 AC091874.3-201ENST00000512672 1195 ntBASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 PTBP1P-201ENST00000554374 1601 ntBASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA9Q9UGM1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 HLA-L-209ENST00000420110 1011 ntBASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 AL138781.1-201ENST00000566567 1274 ntBASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA9Q9UGM1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 ID1-201ENST00000376105 1233 ntBASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 AC142086.2-201ENST00000569753 217 ntBASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA9Q9UGM1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 AC073210.2-201ENST00000430369 194 ntBASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 AL031963.3-201ENST00000606441 850 ntBASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 AC133041.1-202ENST00000642053 222 ntBASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 KRT8P20-201ENST00000423953 1409 ntBASIC18.15■□□□□ 0.5
CHRNA9Q9UGM1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.14■□□□□ 0.5
CHRNA9Q9UGM1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRNA9Q9UGM1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRNA9Q9UGM1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRNA9Q9UGM1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.14■□□□□ 0.5
CHRNA9Q9UGM1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNA9Q9UGM1 AC125437.2-201ENST00000625180 2167 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms