Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 HLA-B-256ENST00000639848 1089 ntBASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 AL691432.2-201ENST00000607222 2038 ntBASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN4Q9NRR5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 AC083880.1-201ENST00000608266 535 ntBASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
UBQLN4Q9NRR5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN4Q9NRR5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 AC092368.3-202ENST00000574180 1591 ntBASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN4Q9NRR5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 AC060766.5-201ENST00000590539 871 ntBASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN4Q9NRR5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN4Q9NRR5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN4Q9NRR5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN4Q9NRR5 PCDHAC2-203ENST00000615316 3011 ntBASIC18.31■□□□□ 0.52
UBQLN4Q9NRR5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.31■□□□□ 0.52
UBQLN4Q9NRR5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN4Q9NRR5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms