Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 AC005181.1-201ENST00000604782 1256 ntBASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTPS2Q9NRF8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTPS2Q9NRF8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 AC069236.1-201ENST00000604339 616 ntBASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTPS2Q9NRF8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AC087289.5-201ENST00000586076 3175 ntBASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AC026185.1-201ENST00000445748 174 ntBASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AL356652.1-201ENST00000615962 565 ntBASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 AC008694.1-202ENST00000636953 945 ntBASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 CYP21A1P-202ENST00000354927 1481 ntBASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTPS2Q9NRF8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 AC120498.9-201ENST00000339021 3867 ntBASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 RAP2CP1-201ENST00000605103 478 ntBASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTPS2Q9NRF8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTPS2Q9NRF8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTPS2Q9NRF8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTPS2Q9NRF8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTPS2Q9NRF8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTPS2Q9NRF8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms