Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 AL691432.2-201ENST00000607222 2038 ntBASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.28■□□□□ 0.52
KRCC1Q9NPI7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 TERF1P5-201ENST00000477545 1207 ntBASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.27■□□□□ 0.52
KRCC1Q9NPI7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRCC1Q9NPI7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.27■□□□□ 0.51
KRCC1Q9NPI7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRCC1Q9NPI7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 KRT18P11-201ENST00000435214 1283 ntBASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.25■□□□□ 0.51
KRCC1Q9NPI7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 AC010536.3-201ENST00000620306 533 ntBASIC18.24■□□□□ 0.51
KRCC1Q9NPI7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms