Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL157384.1-201ENST00000445995 2473 ntBASIC21.64■■□□□ 1.05
CDT1Q9H211 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDT1Q9H211 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
CDT1Q9H211 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.63■■□□□ 1.05
CDT1Q9H211 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.63■■□□□ 1.05
CDT1Q9H211 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.63■■□□□ 1.05
CDT1Q9H211 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.63■■□□□ 1.05
CDT1Q9H211 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
CDT1Q9H211 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.63■■□□□ 1.05
CDT1Q9H211 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.63■■□□□ 1.05
CDT1Q9H211 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.63■■□□□ 1.05
CDT1Q9H211 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDT1Q9H211 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
CDT1Q9H211 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CDT1Q9H211 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.62■■□□□ 1.05
CDT1Q9H211 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDT1Q9H211 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.62■■□□□ 1.05
CDT1Q9H211 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.62■■□□□ 1.05
CDT1Q9H211 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDT1Q9H211 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDT1Q9H211 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.62■■□□□ 1.05
CDT1Q9H211 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.62■■□□□ 1.05
CDT1Q9H211 AP006294.2-201ENST00000641667 209 ntBASIC21.62■■□□□ 1.05
CDT1Q9H211 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.62■■□□□ 1.05
CDT1Q9H211 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDT1Q9H211 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDT1Q9H211 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.62■■□□□ 1.05
CDT1Q9H211 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CDT1Q9H211 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.61■■□□□ 1.05
CDT1Q9H211 AC116351.2-201ENST00000606540 1585 ntBASIC21.61■■□□□ 1.05
CDT1Q9H211 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.61■■□□□ 1.05
CDT1Q9H211 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CDT1Q9H211 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.61■■□□□ 1.05
CDT1Q9H211 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.61■■□□□ 1.05
CDT1Q9H211 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.61■■□□□ 1.05
CDT1Q9H211 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.61■■□□□ 1.05
CDT1Q9H211 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.61■■□□□ 1.05
CDT1Q9H211 AC008550.1-201ENST00000511500 884 ntBASIC21.61■■□□□ 1.05
CDT1Q9H211 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.61■■□□□ 1.05
CDT1Q9H211 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDT1Q9H211 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDT1Q9H211 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.61■■□□□ 1.05
CDT1Q9H211 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.6■■□□□ 1.05
CDT1Q9H211 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 PKD1P6-201ENST00000343738 4769 ntBASIC21.6■■□□□ 1.05
CDT1Q9H211 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDT1Q9H211 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.6■■□□□ 1.05
CDT1Q9H211 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.6■■□□□ 1.05
CDT1Q9H211 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.6■■□□□ 1.05
CDT1Q9H211 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.6■■□□□ 1.05
CDT1Q9H211 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.6■■□□□ 1.05
CDT1Q9H211 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.6■■□□□ 1.05
CDT1Q9H211 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.6■■□□□ 1.05
CDT1Q9H211 LINC01006-201ENST00000333319 2292 ntBASIC21.6■■□□□ 1.05
CDT1Q9H211 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDT1Q9H211 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.6■■□□□ 1.05
CDT1Q9H211 NBPF21P-201ENST00000425093 1451 ntBASIC21.59■■□□□ 1.05
CDT1Q9H211 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDT1Q9H211 AC018553.1-201ENST00000616682 1458 ntBASIC21.59■■□□□ 1.05
CDT1Q9H211 PHGDH-210ENST00000641115 1638 ntBASIC21.59■■□□□ 1.05
CDT1Q9H211 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.59■■□□□ 1.05
CDT1Q9H211 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDT1Q9H211 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.59■■□□□ 1.05
CDT1Q9H211 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms