Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM2Q9C040 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 AL589743.5-201ENST00000616611 1050 ntBASIC18.32■□□□□ 0.52
TRIM2Q9C040 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRIM2Q9C040 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM2Q9C040 KRT8P17-201ENST00000453110 1448 ntBASIC18.32■□□□□ 0.52
TRIM2Q9C040 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 PTBP1P-201ENST00000554374 1601 ntBASIC18.31■□□□□ 0.52
TRIM2Q9C040 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 AL512625.2-201ENST00000417533 625 ntBASIC18.31■□□□□ 0.52
TRIM2Q9C040 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 AL691432.2-201ENST00000607222 2038 ntBASIC18.31■□□□□ 0.52
TRIM2Q9C040 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM2Q9C040 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM2Q9C040 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 GPX1P1-201ENST00000388829 606 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 AL355472.2-201ENST00000422958 438 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 AC005181.1-201ENST00000604782 1256 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 AL050303.2-201ENST00000619798 666 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 AC010980.2-201ENST00000587099 1412 ntBASIC18.3■□□□□ 0.52
TRIM2Q9C040 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM2Q9C040 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM2Q9C040 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.29■□□□□ 0.52
TRIM2Q9C040 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 AL031963.3-201ENST00000606441 850 ntBASIC18.29■□□□□ 0.52
TRIM2Q9C040 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 KRT8P20-201ENST00000423953 1409 ntBASIC18.29■□□□□ 0.52
TRIM2Q9C040 KRT16P6-202ENST00000425692 1426 ntBASIC18.29■□□□□ 0.52
TRIM2Q9C040 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM2Q9C040 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM2Q9C040 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM2Q9C040 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM2Q9C040 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms