Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM4Q9C037 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM4Q9C037 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM4Q9C037 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM4Q9C037 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM4Q9C037 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM4Q9C037 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM4Q9C037 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM4Q9C037 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM4Q9C037 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM4Q9C037 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRIM4Q9C037 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM4Q9C037 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.77■□□□□ 0.75
TRIM4Q9C037 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
TRIM4Q9C037 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 MIR4758-201ENST00000577688 71 ntBASIC19.76■□□□□ 0.75
TRIM4Q9C037 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM4Q9C037 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM4Q9C037 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM4Q9C037 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM4Q9C037 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 AC142381.4-202ENST00000563973 229 ntBASIC19.75■□□□□ 0.75
TRIM4Q9C037 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TRIM4Q9C037 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM4Q9C037 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM4Q9C037 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 MYCNOS-205ENST00000641950 531 ntBASIC19.74■□□□□ 0.75
TRIM4Q9C037 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM4Q9C037 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM4Q9C037 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM4Q9C037 AC005082.1-201ENST00000413042 2259 ntBASIC19.73■□□□□ 0.75
TRIM4Q9C037 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM4Q9C037 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TRIM4Q9C037 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM4Q9C037 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM4Q9C037 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM4Q9C037 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM4Q9C037 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM4Q9C037 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM4Q9C037 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM4Q9C037 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM4Q9C037 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms