Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TMEM47Q9BQJ4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 AC008550.1-201ENST00000511500 884 ntBASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TMEM47Q9BQJ4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM47Q9BQJ4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 LINC01006-201ENST00000333319 2292 ntBASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 AC116351.2-201ENST00000606540 1585 ntBASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM47Q9BQJ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 AL391422.3-201ENST00000603791 2761 ntBASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 NBPF21P-201ENST00000425093 1451 ntBASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM47Q9BQJ4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 AC018553.1-201ENST00000616682 1458 ntBASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM47Q9BQJ4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms