Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 AC068880.1-201ENST00000507289 2297 ntBASIC13.28□□□□□ -0.28
LITAFQ99732 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LITAFQ99732 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.27□□□□□ -0.28
LITAFQ99732 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.28
LITAFQ99732 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LITAFQ99732 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LITAFQ99732 AC006333.2-201ENST00000607957 2099 ntBASIC13.27□□□□□ -0.28
LITAFQ99732 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LITAFQ99732 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.27□□□□□ -0.29
LITAFQ99732 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LITAFQ99732 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LITAFQ99732 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.27□□□□□ -0.29
LITAFQ99732 AC092171.4-201ENST00000609130 632 ntBASIC13.27□□□□□ -0.29
LITAFQ99732 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.27□□□□□ -0.29
LITAFQ99732 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LITAFQ99732 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.27□□□□□ -0.29
LITAFQ99732 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LITAFQ99732 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LITAFQ99732 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LITAFQ99732 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LITAFQ99732 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LITAFQ99732 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.26□□□□□ -0.29
LITAFQ99732 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.26□□□□□ -0.29
LITAFQ99732 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LITAFQ99732 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC13.26□□□□□ -0.29
LITAFQ99732 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.26□□□□□ -0.29
LITAFQ99732 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.26□□□□□ -0.29
LITAFQ99732 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.26□□□□□ -0.29
LITAFQ99732 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LITAFQ99732 AL161938.1-201ENST00000569833 2180 ntBASIC13.25□□□□□ -0.29
LITAFQ99732 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.25□□□□□ -0.29
LITAFQ99732 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.25□□□□□ -0.29
LITAFQ99732 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.25□□□□□ -0.29
LITAFQ99732 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.25□□□□□ -0.29
LITAFQ99732 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.25□□□□□ -0.29
LITAFQ99732 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 AC116050.2-201ENST00000612102 1779 ntBASIC13.25□□□□□ -0.29
LITAFQ99732 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LITAFQ99732 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 FZD10-202ENST00000539839 3282 ntBASIC13.24□□□□□ -0.29
LITAFQ99732 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 WIZP1-201ENST00000531444 2299 ntBASIC13.24□□□□□ -0.29
LITAFQ99732 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LITAFQ99732 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.24□□□□□ -0.29
LITAFQ99732 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.24□□□□□ -0.29
LITAFQ99732 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms