Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 snR55snR55 98 nt-0.75□□□□□ -2.53
ATG40Q99325 YOR170WYOR170W 306 nt-0.78□□□□□ -2.53
ATG40Q99325 snR50snR50 90 nt-0.79□□□□□ -2.54
ATG40Q99325 snR39BsnR39B 96 nt-0.8□□□□□ -2.54
ATG40Q99325 snR49snR49 165 nt-0.8□□□□□ -2.54
ATG40Q99325 YER090C-AYER090C-A 90 nt-0.81□□□□□ -2.54
ATG40Q99325 YNL266WYNL266W 420 nt-0.82□□□□□ -2.54
ATG40Q99325 snR33snR33 183 nt-0.82□□□□□ -2.54
ATG40Q99325 PMP2YEL017C-A 132 nt-0.83□□□□□ -2.54
ATG40Q99325 YGR146C-AYGR146C-A 162 nt-0.83□□□□□ -2.54
ATG40Q99325 RDS3YPR094W 324 nt-0.83□□□□□ -2.54
ATG40Q99325 YNL097C-BYNL097C-B 123 nt-0.84□□□□□ -2.54
ATG40Q99325 YOR329W-AYOR329W-A 210 nt-0.84□□□□□ -2.54
ATG40Q99325 YOL155W-AYOL155W-A 135 nt-0.86□□□□□ -2.55
ATG40Q99325 YOR302WYOR302W 78 nt-0.88□□□□□ -2.55
ATG40Q99325 YHR175W-AYHR175W-A 150 nt-0.89□□□□□ -2.55
ATG40Q99325 tT(UGU)G1tT(UGU)G1 72 nt-0.89□□□□□ -2.55
ATG40Q99325 tT(UGU)G2tT(UGU)G2 72 nt-0.89□□□□□ -2.55
ATG40Q99325 tT(UGU)PtT(UGU)P 72 nt-0.89□□□□□ -2.55
ATG40Q99325 JLP2YMR132C 627 nt-0.89□□□□□ -2.55
ATG40Q99325 YPL152W-AYPL152W-A 99 nt-0.91□□□□□ -2.56
ATG40Q99325 snR65snR65 100 nt-0.92□□□□□ -2.56
ATG40Q99325 tD(GUC)QtD(GUC)Q 75 nt-0.95□□□□□ -2.56
ATG40Q99325 YHL009W-BYHL009W-B 5409 nt-0.95□□□□□ -2.56
ATG40Q99325 tR(ACG)Q2tR(ACG)Q2 74 nt-0.96□□□□□ -2.56
ATG40Q99325 snR56snR56 88 nt-0.98□□□□□ -2.57
ATG40Q99325 YBR178WYBR178W 375 nt-0.98□□□□□ -2.57
ATG40Q99325 snR67snR67 82 nt-1□□□□□ -2.57
ATG40Q99325 YLR286W-AYLR286W-A 135 nt-1□□□□□ -2.57
ATG40Q99325 snR52snR52 92 nt-1□□□□□ -2.57
ATG40Q99325 YGL188C-AYGL188C-A 141 nt-1.03□□□□□ -2.57
ATG40Q99325 YNL205CYNL205C 423 nt-1.03□□□□□ -2.57
ATG40Q99325 snR161snR161 161 nt-1.03□□□□□ -2.57
ATG40Q99325 snR48snR48 113 nt-1.03□□□□□ -2.57
ATG40Q99325 YDL159C-BYDL159C-B 177 nt-1.04□□□□□ -2.58
ATG40Q99325 SKI7YOR076C 2244 nt-1.04□□□□□ -2.58
ATG40Q99325 tL(UAA)QtL(UAA)Q 85 nt-1.06□□□□□ -2.58
ATG40Q99325 YLR342W-AYLR342W-A 174 nt-1.08□□□□□ -2.58
ATG40Q99325 snR80snR80 171 nt-1.11□□□□□ -2.59
ATG40Q99325 YOR102WYOR102W 351 nt-1.11□□□□□ -2.59
ATG40Q99325 YOR231C-AYOR231C-A 201 nt-1.11□□□□□ -2.59
ATG40Q99325 YBR223W-AYBR223W-A 120 nt-1.14□□□□□ -2.59
ATG40Q99325 tP(UGG)QtP(UGG)Q 72 nt-1.15□□□□□ -2.59
ATG40Q99325 YHL015W-AYHL015W-A 84 nt-1.16□□□□□ -2.6
ATG40Q99325 YDR524W-CYDR524W-C 90 nt-1.17□□□□□ -2.6
ATG40Q99325 YLR299C-AYLR299C-A 93 nt-1.21□□□□□ -2.6
ATG40Q99325 YML054C-AYML054C-A 159 nt-1.24□□□□□ -2.61
ATG40Q99325 YBR196C-AYBR196C-A 150 nt-1.24□□□□□ -2.61
ATG40Q99325 YNR077CYNR077C 255 nt-1.26□□□□□ -2.61
ATG40Q99325 YNL198CYNL198C 303 nt-1.31□□□□□ -2.62
ATG40Q99325 YDR406W-AYDR406W-A 246 nt-1.32□□□□□ -2.62
ATG40Q99325 YBL053WYBL053W 375 nt-1.38□□□□□ -2.63
ATG40Q99325 CDC65tQ(CUG)M 72 nt-1.4□□□□□ -2.63
ATG40Q99325 snR77snR77 88 nt-1.41□□□□□ -2.64
ATG40Q99325 SOM1YEL059C-A 225 nt-1.43□□□□□ -2.64
ATG40Q99325 YGR240C-AYGR240C-A 201 nt-1.43□□□□□ -2.64
ATG40Q99325 YHR180C-BYHR180C-B 105 nt-1.43□□□□□ -2.64
ATG40Q99325 YJL150WYJL150W 303 nt-1.43□□□□□ -2.64
ATG40Q99325 YOR376W-AYOR376W-A 156 nt-1.45□□□□□ -2.64
ATG40Q99325 YMR315W-AYMR315W-A 108 nt-1.55□□□□□ -2.66
ATG40Q99325 YCR095W-AYCR095W-A 159 nt-1.56□□□□□ -2.66
ATG40Q99325 tY(GUA)QtY(GUA)Q 84 nt-1.56□□□□□ -2.66
ATG40Q99325 snR81snR81 201 nt-1.58□□□□□ -2.66
ATG40Q99325 YKL106C-AYKL106C-A 120 nt-1.62□□□□□ -2.67
ATG40Q99325 YMR046W-AYMR046W-A 129 nt-1.64□□□□□ -2.67
ATG40Q99325 YOR316C-AYOR316C-A 210 nt-1.66□□□□□ -2.68
ATG40Q99325 SPG3YDR504C 384 nt-1.68□□□□□ -2.68
ATG40Q99325 YBR109W-AYBR109W-A 225 nt-1.7□□□□□ -2.68
ATG40Q99325 RPL41AYDL184C 78 nt-1.71□□□□□ -2.68
ATG40Q99325 YGR151CYGR151C 336 nt-1.71□□□□□ -2.68
ATG40Q99325 YOL083C-AYOL083C-A 141 nt-1.72□□□□□ -2.68
ATG40Q99325 YBR296C-AYBR296C-A 120 nt-1.72□□□□□ -2.68
ATG40Q99325 Q0142Q0142 177 nt-1.76□□□□□ -2.69
ATG40Q99325 YBL071C-BYBL071C-B 99 nt-1.76□□□□□ -2.69
ATG40Q99325 snR38snR38 95 nt-1.8□□□□□ -2.7
ATG40Q99325 YOL164W-AYOL164W-A 183 nt-1.82□□□□□ -2.7
ATG40Q99325 YCL001W-BYCL001W-B 255 nt-1.83□□□□□ -2.7
ATG40Q99325 YOR309CYOR309C 381 nt-1.87□□□□□ -2.71
ATG40Q99325 YLR466C-BYLR466C-B 117 nt-1.88□□□□□ -2.71
ATG40Q99325 tM(CAU)Q1tM(CAU)Q1 76 nt-1.89□□□□□ -2.71
ATG40Q99325 snR47snR47 99 nt-1.9□□□□□ -2.71
ATG40Q99325 YAL037C-AYAL037C-A 93 nt-1.92□□□□□ -2.72
ATG40Q99325 YNL338WYNL338W 159 nt-1.94□□□□□ -2.72
ATG40Q99325 YBL100W-CYBL100W-C 120 nt-2□□□□□ -2.73
ATG40Q99325 snR6snR6 112 nt-2.09□□□□□ -2.74
ATG40Q99325 YNL337WYNL337W 255 nt-2.09□□□□□ -2.74
ATG40Q99325 tS(GCU)Q1tS(GCU)Q1 86 nt-2.12□□□□□ -2.75
ATG40Q99325 YKL225WYKL225W 348 nt-2.16□□□□□ -2.76
ATG40Q99325 YOR335W-AYOR335W-A 81 nt-2.19□□□□□ -2.76
ATG40Q99325 snR73snR73 106 nt-2.26□□□□□ -2.77
ATG40Q99325 RPL41BYDL133C-A 78 nt-2.26□□□□□ -2.77
ATG40Q99325 YDL114W-AYDL114W-A 114 nt-2.27□□□□□ -2.77
ATG40Q99325 YBR126W-BYBR126W-B 144 nt-2.27□□□□□ -2.77
ATG40Q99325 tV(UAC)QtV(UAC)Q 76 nt-2.29□□□□□ -2.78
ATG40Q99325 YGL041C-BYGL041C-B 183 nt-2.31□□□□□ -2.78
ATG40Q99325 YNL103W-AYNL103W-A 90 nt-2.36□□□□□ -2.79
ATG40Q99325 YDR034C-AYDR034C-A 177 nt-2.38□□□□□ -2.79
ATG40Q99325 Q0032Q0032 291 nt-2.4□□□□□ -2.79
ATG40Q99325 snR85snR85 171 nt-2.4□□□□□ -2.79
ATG40Q99325 snR61snR61 90 nt-2.43□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms