Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 AL121832.2-201ENST00000610979 668 ntBASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB18PQ96TA0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB18PQ96TA0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHB18PQ96TA0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHB18PQ96TA0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB18PQ96TA0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB18PQ96TA0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 AC006970.2-201ENST00000450065 779 ntBASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB18PQ96TA0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 HLA-G-202ENST00000376815 851 ntBASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 HLA-G-203ENST00000376818 1127 ntBASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 AC116562.4-201ENST00000641316 2276 ntBASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHB18PQ96TA0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 NCF1B-203ENST00000435988 1254 ntBASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB18PQ96TA0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms