Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 AC098934.4-201ENST00000564127 592 ntBASIC23.61■■□□□ 1.37
NEK1Q96PY6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NEK1Q96PY6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.61■■□□□ 1.37
NEK1Q96PY6 AC125437.2-201ENST00000625180 2167 ntBASIC23.61■■□□□ 1.37
NEK1Q96PY6 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.6■■□□□ 1.37
NEK1Q96PY6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NEK1Q96PY6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.6■■□□□ 1.37
NEK1Q96PY6 AC097658.1-201ENST00000475555 843 ntBASIC23.6■■□□□ 1.37
NEK1Q96PY6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.6■■□□□ 1.37
NEK1Q96PY6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.6■■□□□ 1.37
NEK1Q96PY6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
NEK1Q96PY6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NEK1Q96PY6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NEK1Q96PY6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NEK1Q96PY6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
NEK1Q96PY6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.58■■□□□ 1.37
NEK1Q96PY6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.58■■□□□ 1.37
NEK1Q96PY6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.58■■□□□ 1.37
NEK1Q96PY6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NEK1Q96PY6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.58■■□□□ 1.37
NEK1Q96PY6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.58■■□□□ 1.37
NEK1Q96PY6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NEK1Q96PY6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NEK1Q96PY6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.58■■□□□ 1.36
NEK1Q96PY6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
NEK1Q96PY6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NEK1Q96PY6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
NEK1Q96PY6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NEK1Q96PY6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 AC073210.2-201ENST00000430369 194 ntBASIC23.57■■□□□ 1.36
NEK1Q96PY6 AC142086.2-201ENST00000569753 217 ntBASIC23.57■■□□□ 1.36
NEK1Q96PY6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NEK1Q96PY6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NEK1Q96PY6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 AC005829.2-201ENST00000571422 1056 ntBASIC23.56■■□□□ 1.36
NEK1Q96PY6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.56■■□□□ 1.36
NEK1Q96PY6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NEK1Q96PY6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms