Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VCPIP1Q96JH7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21■□□□□ 0.95
VCPIP1Q96JH7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21■□□□□ 0.95
VCPIP1Q96JH7 AC006970.2-201ENST00000450065 779 ntBASIC21■□□□□ 0.95
VCPIP1Q96JH7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21■□□□□ 0.95
VCPIP1Q96JH7 PPP1R14BP3-201ENST00000509033 445 ntBASIC21■□□□□ 0.95
VCPIP1Q96JH7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21■□□□□ 0.95
VCPIP1Q96JH7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21■□□□□ 0.95
VCPIP1Q96JH7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21■□□□□ 0.95
VCPIP1Q96JH7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCPIP1Q96JH7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21■□□□□ 0.95
VCPIP1Q96JH7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VCPIP1Q96JH7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCPIP1Q96JH7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21■□□□□ 0.95
VCPIP1Q96JH7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 NCF1B-203ENST00000435988 1254 ntBASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 AC092118.2-201ENST00000613495 667 ntBASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCPIP1Q96JH7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 PHGDH-210ENST00000641115 1638 ntBASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 ABHD17AP1-201ENST00000358206 933 ntBASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCPIP1Q96JH7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 AL355802.2-201ENST00000402069 882 ntBASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 AC073210.2-201ENST00000430369 194 ntBASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCPIP1Q96JH7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 TREX1-205ENST00000625293 1783 ntBASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 GUSBP6-202ENST00000438529 1198 ntBASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms