Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 C1QL1P1-201ENST00000568105 661 ntBASIC17.49■□□□□ 0.39
USP9XQ93008 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
USP9XQ93008 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.49■□□□□ 0.39
USP9XQ93008 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.49■□□□□ 0.39
USP9XQ93008 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.49■□□□□ 0.39
USP9XQ93008 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.49■□□□□ 0.39
USP9XQ93008 HMGN1P19-201ENST00000436976 333 ntBASIC17.49■□□□□ 0.39
USP9XQ93008 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.49■□□□□ 0.39
USP9XQ93008 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
USP9XQ93008 AC083849.1-201ENST00000615227 514 ntBASIC17.49■□□□□ 0.39
USP9XQ93008 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.49■□□□□ 0.39
USP9XQ93008 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP9XQ93008 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.49■□□□□ 0.39
USP9XQ93008 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.48■□□□□ 0.39
USP9XQ93008 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 AC092338.2-201ENST00000568827 1415 ntBASIC17.48■□□□□ 0.39
USP9XQ93008 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 HYMAI.1-201ENST00000620949 238 ntBASIC17.48■□□□□ 0.39
USP9XQ93008 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP9XQ93008 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP9XQ93008 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP9XQ93008 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.47■□□□□ 0.39
USP9XQ93008 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USP9XQ93008 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 CKBP1-201ENST00000565489 1086 ntBASIC17.47■□□□□ 0.39
USP9XQ93008 AC111152.3-201ENST00000569699 673 ntBASIC17.47■□□□□ 0.39
USP9XQ93008 AC012313.10-201ENST00000623509 926 ntBASIC17.47■□□□□ 0.39
USP9XQ93008 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.47■□□□□ 0.39
USP9XQ93008 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 AC096733.2-201ENST00000609937 1394 ntBASIC17.47■□□□□ 0.39
USP9XQ93008 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USP9XQ93008 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.47■□□□□ 0.39
USP9XQ93008 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.47■□□□□ 0.39
USP9XQ93008 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP9XQ93008 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
USP9XQ93008 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.46■□□□□ 0.39
USP9XQ93008 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USP9XQ93008 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 RCC2P6-201ENST00000526625 1557 ntBASIC17.46■□□□□ 0.39
USP9XQ93008 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 HOMER2P1-201ENST00000455653 964 ntBASIC17.46■□□□□ 0.39
USP9XQ93008 AC009078.2-202ENST00000463353 338 ntBASIC17.46■□□□□ 0.39
USP9XQ93008 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.46■□□□□ 0.39
USP9XQ93008 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
USP9XQ93008 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.46■□□□□ 0.39
USP9XQ93008 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP9XQ93008 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP9XQ93008 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
USP9XQ93008 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms