Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 NIFKP9-201ENST00000419265 221 ntBASIC18.64■□□□□ 0.57
CT55Q8WUE5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 AP000525.1-201ENST00000608286 694 ntBASIC18.64■□□□□ 0.57
CT55Q8WUE5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 AC079598.2-202ENST00000546624 1451 ntBASIC18.64■□□□□ 0.57
CT55Q8WUE5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CT55Q8WUE5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.64■□□□□ 0.57
CT55Q8WUE5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CT55Q8WUE5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CT55Q8WUE5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CT55Q8WUE5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.63■□□□□ 0.57
CT55Q8WUE5 KSR1P1-201ENST00000446298 240 ntBASIC18.63■□□□□ 0.57
CT55Q8WUE5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.63■□□□□ 0.57
CT55Q8WUE5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CT55Q8WUE5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CT55Q8WUE5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CT55Q8WUE5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CT55Q8WUE5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.63■□□□□ 0.57
CT55Q8WUE5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CT55Q8WUE5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 UNC93B2-201ENST00000285383 730 ntBASIC18.62■□□□□ 0.57
CT55Q8WUE5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 KRT16P1-201ENST00000399124 1418 ntBASIC18.62■□□□□ 0.57
CT55Q8WUE5 KRT8P9-201ENST00000558927 1449 ntBASIC18.62■□□□□ 0.57
CT55Q8WUE5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CT55Q8WUE5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CT55Q8WUE5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 AC079834.2-201ENST00000609776 1949 ntBASIC18.61■□□□□ 0.57
CT55Q8WUE5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CT55Q8WUE5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CT55Q8WUE5 AP006587.1-201ENST00000534129 1502 ntBASIC18.61■□□□□ 0.57
CT55Q8WUE5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CT55Q8WUE5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 MIR1238-201ENST00000408483 83 ntBASIC18.61■□□□□ 0.57
CT55Q8WUE5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 MIR6786-201ENST00000616843 113 ntBASIC18.61■□□□□ 0.57
CT55Q8WUE5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.61■□□□□ 0.57
CT55Q8WUE5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 AC007225.1-201ENST00000566331 1836 ntBASIC18.6■□□□□ 0.57
CT55Q8WUE5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CT55Q8WUE5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CT55Q8WUE5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CT55Q8WUE5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CT55Q8WUE5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CT55Q8WUE5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms