Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SSH3Q8TE77 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.69■■□□□ 1.54
SSH3Q8TE77 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
SSH3Q8TE77 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SSH3Q8TE77 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SSH3Q8TE77 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 ABHD17AP1-201ENST00000358206 933 ntBASIC24.68■■□□□ 1.54
SSH3Q8TE77 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.68■■□□□ 1.54
SSH3Q8TE77 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SSH3Q8TE77 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 AC069544.1-201ENST00000609399 999 ntBASIC24.67■■□□□ 1.54
SSH3Q8TE77 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
SSH3Q8TE77 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SSH3Q8TE77 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SSH3Q8TE77 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SSH3Q8TE77 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SSH3Q8TE77 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SSH3Q8TE77 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 AC006058.3-201ENST00000606217 1069 ntBASIC24.66■■□□□ 1.54
SSH3Q8TE77 AL121829.2-201ENST00000620908 328 ntBASIC24.66■■□□□ 1.54
SSH3Q8TE77 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SSH3Q8TE77 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.66■■□□□ 1.54
SSH3Q8TE77 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 AC018553.1-201ENST00000616682 1458 ntBASIC24.65■■□□□ 1.54
SSH3Q8TE77 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.65■■□□□ 1.54
SSH3Q8TE77 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 AC073648.6-201ENST00000641589 218 ntBASIC24.65■■□□□ 1.54
SSH3Q8TE77 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.65■■□□□ 1.54
SSH3Q8TE77 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SSH3Q8TE77 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.64■■□□□ 1.54
SSH3Q8TE77 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.64■■□□□ 1.54
SSH3Q8TE77 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.64■■□□□ 1.54
SSH3Q8TE77 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.64■■□□□ 1.54
SSH3Q8TE77 TFP1-202ENST00000475455 1573 ntBASIC24.64■■□□□ 1.54
SSH3Q8TE77 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SSH3Q8TE77 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SSH3Q8TE77 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SSH3Q8TE77 KRT17P3-201ENST00000420566 1262 ntBASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms