Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 CNN2P6-201ENST00000439038 900 ntBASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.73■□□□□ 0.91
CCHCR1Q8TD31 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 AC125437.2-201ENST00000625180 2167 ntBASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 AL162412.1-201ENST00000567129 965 ntBASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.72■□□□□ 0.91
CCHCR1Q8TD31 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCHCR1Q8TD31 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCHCR1Q8TD31 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCHCR1Q8TD31 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 AL691432.2-201ENST00000607222 2038 ntBASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 AC005181.1-201ENST00000604782 1256 ntBASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 AC068338.2-201ENST00000563278 1430 ntBASIC20.7■□□□□ 0.9
CCHCR1Q8TD31 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.69■□□□□ 0.9
CCHCR1Q8TD31 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CCHCR1Q8TD31 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms