Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTL9Q8NET4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.66■■□□□ 1.54
RTL9Q8NET4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.65■■□□□ 1.54
RTL9Q8NET4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
RTL9Q8NET4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTL9Q8NET4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.65■■□□□ 1.54
RTL9Q8NET4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RTL9Q8NET4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RTL9Q8NET4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RTL9Q8NET4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RTL9Q8NET4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RTL9Q8NET4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RTL9Q8NET4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RTL9Q8NET4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
RTL9Q8NET4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 NIFKP9-201ENST00000419265 221 ntBASIC24.64■■□□□ 1.53
RTL9Q8NET4 FAM197Y1-201ENST00000421178 764 ntBASIC24.64■■□□□ 1.53
RTL9Q8NET4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RTL9Q8NET4 NUDT16P1-203ENST00000513809 620 ntBASIC24.64■■□□□ 1.53
RTL9Q8NET4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RTL9Q8NET4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
RTL9Q8NET4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 AC092720.2-201ENST00000602388 1665 ntBASIC24.63■■□□□ 1.53
RTL9Q8NET4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL9Q8NET4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.63■■□□□ 1.53
RTL9Q8NET4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.62■■□□□ 1.53
RTL9Q8NET4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RTL9Q8NET4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 C1QL1P1-201ENST00000568105 661 ntBASIC24.62■■□□□ 1.53
RTL9Q8NET4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.62■■□□□ 1.53
RTL9Q8NET4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RTL9Q8NET4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.62■■□□□ 1.53
RTL9Q8NET4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTL9Q8NET4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 AP002982.1-201ENST00000492365 877 ntBASIC24.61■■□□□ 1.53
RTL9Q8NET4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.61■■□□□ 1.53
RTL9Q8NET4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTL9Q8NET4 TFP1-202ENST00000475455 1573 ntBASIC24.61■■□□□ 1.53
RTL9Q8NET4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.6■■□□□ 1.53
RTL9Q8NET4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RTL9Q8NET4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.6■■□□□ 1.53
RTL9Q8NET4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTL9Q8NET4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTL9Q8NET4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms