Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC197Q8NCU1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC197Q8NCU1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 AC135050.7-201ENST00000624508 2218 ntBASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 SYT6-210ENST00000641643 1587 ntBASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC197Q8NCU1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC197Q8NCU1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CCDC197Q8NCU1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC197Q8NCU1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC197Q8NCU1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 HSD17B1P1-201ENST00000590052 955 ntBASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 MIR4787-201ENST00000607364 84 ntBASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC197Q8NCU1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 TSPY9P-201ENST00000440215 945 ntBASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 TSPY11P-201ENST00000442607 1045 ntBASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 AL033527.3-201ENST00000566366 1196 ntBASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 FZD10-202ENST00000539839 3282 ntBASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC197Q8NCU1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 AC061975.6-201ENST00000579045 1553 ntBASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC197Q8NCU1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms