Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.53■■□□□ 1.04
COLGALT1Q8NBJ5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COLGALT1Q8NBJ5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COLGALT1Q8NBJ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
COLGALT1Q8NBJ5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
COLGALT1Q8NBJ5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COLGALT1Q8NBJ5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 AC004264.1-201ENST00000608354 794 ntBASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLGALT1Q8NBJ5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 TMPOP1-202ENST00000424642 1267 ntBASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
COLGALT1Q8NBJ5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 AL049796.1-201ENST00000565336 1766 ntBASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 RBM17P1-201ENST00000453646 1190 ntBASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 NUDT16P1-203ENST00000513809 620 ntBASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 RN7SL850P-201ENST00000579959 291 ntBASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COLGALT1Q8NBJ5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms