Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1orf52Q8N6N3 KRT8P20-201ENST00000423953 1409 ntBASIC19.08■□□□□ 0.64
C1orf52Q8N6N3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C1orf52Q8N6N3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 MKRN4P-201ENST00000444706 1521 ntBASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 CROCCP5-201ENST00000436658 830 ntBASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C1orf52Q8N6N3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 KRT16P6-202ENST00000425692 1426 ntBASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1orf52Q8N6N3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.05■□□□□ 0.64
C1orf52Q8N6N3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 AL158211.5-201ENST00000623583 2518 ntBASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 AC007952.6-201ENST00000573168 2673 ntBASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 AC003957.1-201ENST00000625108 2673 ntBASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 BX276092.2-201ENST00000417668 665 ntBASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C1orf52Q8N6N3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1orf52Q8N6N3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms