Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 NBPF21P-201ENST00000425093 1451 ntBASIC31.29■■■□□ 2.6
VPS8Q8N3P4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC31.29■■■□□ 2.6
VPS8Q8N3P4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VPS8Q8N3P4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.27■■■□□ 2.6
VPS8Q8N3P4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
VPS8Q8N3P4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
VPS8Q8N3P4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC31.26■■■□□ 2.6
VPS8Q8N3P4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.26■■■□□ 2.6
VPS8Q8N3P4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.26■■■□□ 2.59
VPS8Q8N3P4 AC099778.1-201ENST00000568593 1911 ntBASIC31.26■■■□□ 2.59
VPS8Q8N3P4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
VPS8Q8N3P4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
VPS8Q8N3P4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
VPS8Q8N3P4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 RARRES2P10-201ENST00000564312 460 ntBASIC31.25■■■□□ 2.59
VPS8Q8N3P4 LINC01006-201ENST00000333319 2292 ntBASIC31.25■■■□□ 2.59
VPS8Q8N3P4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
VPS8Q8N3P4 YBX1P10-201ENST00000444752 975 ntBASIC31.24■■■□□ 2.59
VPS8Q8N3P4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 KRT16P5-201ENST00000455284 522 ntBASIC31.24■■■□□ 2.59
VPS8Q8N3P4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 AC233702.5-201ENST00000584107 538 ntBASIC31.24■■■□□ 2.59
VPS8Q8N3P4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
VPS8Q8N3P4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
VPS8Q8N3P4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms