Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HIST3H2BBQ8N257 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST3H2BBQ8N257 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST3H2BBQ8N257 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 AC018695.7-201ENST00000624587 2492 ntBASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST3H2BBQ8N257 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 BCL2-203ENST00000589955 5011 ntBASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST3H2BBQ8N257 MST1L-201ENST00000442552 2185 ntBASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 AC026202.3-201ENST00000600805 1127 ntBASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 AL691432.2-201ENST00000607222 2038 ntBASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HIST3H2BBQ8N257 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST3H2BBQ8N257 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms