Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 AC092720.2-201ENST00000602388 1665 ntBASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 AC018553.1-201ENST00000616682 1458 ntBASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF28Q8N1W1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 TFP1-202ENST00000475455 1573 ntBASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF28Q8N1W1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 MESTP1-201ENST00000404287 994 ntBASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 AC145285.6-201ENST00000604632 637 ntBASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF28Q8N1W1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF28Q8N1W1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF28Q8N1W1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC27.77■■■□□ 2.04
ARHGEF28Q8N1W1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF28Q8N1W1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC27.77■■■□□ 2.04
ARHGEF28Q8N1W1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF28Q8N1W1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
ARHGEF28Q8N1W1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 KRT18P16-201ENST00000510337 1294 ntBASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 DUT-205ENST00000558813 769 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 BX119927.1-201ENST00000636596 1552 ntBASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF28Q8N1W1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 MIR1224-201ENST00000408193 85 ntBASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC27.75■■■□□ 2.03
ARHGEF28Q8N1W1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 AP006587.1-201ENST00000534129 1502 ntBASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 MMP23A-201ENST00000234610 1017 ntBASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ARHGEF28Q8N1W1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 AC113347.1-201ENST00000413321 391 ntBASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 GOLGA6L3-201ENST00000507199 1679 ntBASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ARHGEF28Q8N1W1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms