Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 AC092118.2-201ENST00000613495 667 ntBASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 HLA-G-202ENST00000376815 851 ntBASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 HLA-G-203ENST00000376818 1127 ntBASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC116Q8IYX3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 AC023632.3-201ENST00000521633 145 ntBASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 MIR4758-201ENST00000577688 71 ntBASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC116Q8IYX3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.77■□□□□ 0.59
CCDC116Q8IYX3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC116Q8IYX3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC116Q8IYX3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC116Q8IYX3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 KRT16P6-202ENST00000425692 1426 ntBASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 AC091874.3-201ENST00000512672 1195 ntBASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 AL138781.1-201ENST00000566567 1274 ntBASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC116Q8IYX3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC116Q8IYX3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms